Case–control studies of association in structured or admixed populations
JK Pritchard, P Donnelly - Theoretical population biology, 2001 - Elsevier
Case–control tests for association are an important tool for mapping complex-trait genes. But
population structure can invalidate this approach, leading to apparent associations at …
population structure can invalidate this approach, leading to apparent associations at …
Coalescents and genealogical structure under neutrality
P Donnelly, S Tavare - Annual review of genetics, 1995 - annualreviews.org
Genealogical or coalescent methods have proved very useful in interpreting and
understanding a wide range of population genetic data. Our aim is to illustrate some of the …
understanding a wide range of population genetic data. Our aim is to illustrate some of the …
Progress and challenges in genome-wide association studies in humans
P Donnelly - Nature, 2008 - nature.com
After more than a decade of hope and hype, researchers are finally making inroads into
understanding the genetic basis of many common human diseases. The use of genome …
understanding the genetic basis of many common human diseases. The use of genome …
Inference of population structure using multilocus genotype data
JK Pritchard, M Stephens, P Donnelly - Genetics, 2000 - academic.oup.com
We describe a model-based clustering method for using multilocus genotype data to infer
population structure and assign individuals to populations. We assume a model in which …
population structure and assign individuals to populations. We assume a model in which …
Large-scale association analysis provides insights into the genetic architecture and pathophysiology of type 2 diabetes
Meta-Analyses of Glucose and Insulin-related traits … - Nature …, 2012 - nature.com
To extend understanding of the genetic architecture and molecular basis of type 2 diabetes
(T2D), we conducted a meta-analysis of genetic variants on the Metabochip, including …
(T2D), we conducted a meta-analysis of genetic variants on the Metabochip, including …
[PDF][PDF] A new statistical method for haplotype reconstruction from population data
M Stephens, NJ Smith, P Donnelly - The American Journal of Human …, 2001 - cell.com
Current routine genotyping methods typically do not provide haplotype information, which is
essential for many analyses of fine-scale molecular-genetics data. Haplotypes can be …
essential for many analyses of fine-scale molecular-genetics data. Haplotypes can be …
Transcriptome and genome sequencing uncovers functional variation in humans
Genome sequencing projects are discovering millions of genetic variants in humans, and
interpretation of their functional effects is essential for understanding the genetic basis of …
interpretation of their functional effects is essential for understanding the genetic basis of …
[HTML][HTML] The UK Biobank resource with deep phenotyping and genomic data
C Bycroft, C Freeman, D Petkova, G Band, LT Elliott… - Nature, 2018 - nature.com
The UK Biobank project is a prospective cohort study with deep genetic and phenotypic data
collected on approximately 500,000 individuals from across the United Kingdom, aged …
collected on approximately 500,000 individuals from across the United Kingdom, aged …
[HTML][HTML] A flexible and accurate genotype imputation method for the next generation of genome-wide association studies
BN Howie, P Donnelly, J Marchini - PLoS genetics, 2009 - journals.plos.org
Genotype imputation methods are now being widely used in the analysis of genome-wide
association studies. Most imputation analyses to date have used the HapMap as a reference …
association studies. Most imputation analyses to date have used the HapMap as a reference …
[PDF][PDF] A comparison of bayesian methods for haplotype reconstruction from population genotype data
M Stephens, P Donnelly - The American Journal of Human Genetics, 2003 - cell.com
In this report, we compare and contrast three previously published Bayesian methods for
inferring haplotypes from genotype data in a population sample. We review the methods …
inferring haplotypes from genotype data in a population sample. We review the methods …